Abstract
Purpose:
To develop and characterize a xeno-free, two-dimensional (2D) differentiation protocol for directing human induced pluripotent stem cells (hIPSCs) toward photoreceptor (PhR)-like cells, using a live-reporter system and transcriptomic analysis to evaluate lineage fidelity and maturation compared to the three-dimensional (3D) culture paradigm.
Methods:
A CRISPR/Cas9-engineered PGP1 hIPSC line expressing fluorescent reporters for retinal markers (VSX2, BRN3B, and RCVRN) was differentiated in adherent culture using chemically defined media supplemented with small molecules (T3, DAPT, taurine, and retinoic acid). Differentiation was assessed over time by immunocytochemistry, flow cytometry, RT-qPCR, ultrastructural imaging (TEM/SEM), and bulk RNA sequencing. Comparative transcriptomic analysis with 3D retinal organoid data was conducted to evaluate developmental kinetics and pathway enrichment.
Results:
The 2D protocol reproducibly generated PhR-like cells expressing PhR-associated protein markers including CRX, NR2F2, RCVRN, THRβ OPSIN-S, OPSN-M/L and ARR3. Flow cytometric analysis demonstrated 93.6%, 96.2% and 70.3% of RCVRN, OPSN-M/L and OPSN-S positive populations at Day 42 (D42) while up to 97.4% of cells stained positive for RCVRN by D52. Early commitment to a PhR lineage was evident by D30, supported by transcriptional profiles consistent with PhR-like ontogeny. Ultrastructural analyses revealed features of putative inner and outer segments, including developing cilia and disc-like 'whorls' supported by expression of gap junction protein markers and cilium markers (TMEM138 and CX36). Bulk RNA sequencing demonstrated faithful temporal regulation of PhR gene networks and highlighted accelerated differentiation compared to 3D cultures.
Conclusion:
This pilot xeno-free 2D differentiation protocol offers a timely and scalable method for generating PhR-like cells from hIPSCs comparable to standard 3D culture systems.
To develop and characterize a xeno-free, two-dimensional (2D) differentiation protocol for directing human induced pluripotent stem cells (hIPSCs) toward photoreceptor (PhR)-like cells, using a live-reporter system and transcriptomic analysis to evaluate lineage fidelity and maturation compared to the three-dimensional (3D) culture paradigm.
Methods:
A CRISPR/Cas9-engineered PGP1 hIPSC line expressing fluorescent reporters for retinal markers (VSX2, BRN3B, and RCVRN) was differentiated in adherent culture using chemically defined media supplemented with small molecules (T3, DAPT, taurine, and retinoic acid). Differentiation was assessed over time by immunocytochemistry, flow cytometry, RT-qPCR, ultrastructural imaging (TEM/SEM), and bulk RNA sequencing. Comparative transcriptomic analysis with 3D retinal organoid data was conducted to evaluate developmental kinetics and pathway enrichment.
Results:
The 2D protocol reproducibly generated PhR-like cells expressing PhR-associated protein markers including CRX, NR2F2, RCVRN, THRβ OPSIN-S, OPSN-M/L and ARR3. Flow cytometric analysis demonstrated 93.6%, 96.2% and 70.3% of RCVRN, OPSN-M/L and OPSN-S positive populations at Day 42 (D42) while up to 97.4% of cells stained positive for RCVRN by D52. Early commitment to a PhR lineage was evident by D30, supported by transcriptional profiles consistent with PhR-like ontogeny. Ultrastructural analyses revealed features of putative inner and outer segments, including developing cilia and disc-like 'whorls' supported by expression of gap junction protein markers and cilium markers (TMEM138 and CX36). Bulk RNA sequencing demonstrated faithful temporal regulation of PhR gene networks and highlighted accelerated differentiation compared to 3D cultures.
Conclusion:
This pilot xeno-free 2D differentiation protocol offers a timely and scalable method for generating PhR-like cells from hIPSCs comparable to standard 3D culture systems.
| Original language | English |
|---|---|
| Pages | 25-25 |
| Number of pages | 1 |
| Publication status | Published - 10 Nov 2025 |
| Event | Australasian Society for Stem Cell Research Meeting 2025 - QT Surfers Paradise , Gold Coast, Australia Duration: 10 Nov 2025 → 12 Nov 2025 https://asscr.org/event/asscr-meeting-2025/ |
Conference
| Conference | Australasian Society for Stem Cell Research Meeting 2025 |
|---|---|
| Abbreviated title | ASSCR 2025 |
| Country/Territory | Australia |
| City | Gold Coast |
| Period | 10/11/25 → 12/11/25 |
| Other | Within this theme, ASSCR 2025 will explore a range of exciting and cutting-edge topics, such as: Innovative tools and technologies Stem cell models of development and disease Regulating cell fate Stem cells in translational medicine Ethical, clinical and commercial challenges |
| Internet address |
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